Now that a little time has passed since the recent Disqus upgrade, I wanted to create a thread for posting about any technical issues that you are still experiencing with Disqus. Consolidating the issues in one thread will make it easier for me to present to their support staff. To that end, I'd appreciate your keeping the tone civil, even for an issue that's really bugging the crap out of you. ;)
Please be as descriptive as possible and don't forget to include your operating system and browser version, both of which are extremely helpful in diagnosing the issue.
One item that I'm already aware of is that the comment permalinks don't work (i.e. clicking on one will bring you to the top of the thread instead of the actual comment).